adam-assembly-spark2_2.11-0.24.0.jar

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>
  <parent>
    <groupId>org.bdgenomics.adam</groupId>
    <artifactId>adam-parent-spark2_2.11</artifactId>
    <version>0.24.0</version>
    <relativePath>../pom.xml</relativePath>
  </parent>

  <artifactId>adam-assembly-spark2_2.11</artifactId>
  <packaging>jar</packaging>
  <name>ADAM_${scala.version.prefix}: Assembly</name>
  <properties>
    <timestamp>${maven.build.timestamp}</timestamp>
    <maven.build.timestamp.format>yyyy-MM-dd</maven.build.timestamp.format>
  </properties>
  <build>
    <plugins>
      <plugin>
        <groupId>org.codehaus.mojo</groupId>
        <artifactId>templating-maven-plugin</artifactId>
        <executions>
          <execution>
            <id>filter-src</id>
            <goals>
              <goal>filter-sources</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>pl.project13.maven</groupId>
        <artifactId>git-commit-id-plugin</artifactId>
        <executions>
          <execution>
            <goals>
              <goal>revision</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-shade-plugin</artifactId>
        <configuration>
          <createDependencyReducedPom>false</createDependencyReducedPom>
          <filters>
            <filter>
              <artifact>*:*</artifact>
              <excludes>
                <exclude>META-INF/*.SF</exclude>
                <exclude>META-INF/*.DSA</exclude>
                <exclude>META-INF/*.RSA</exclude>
              </excludes>
            </filter>
          </filters>
        </configuration>
        <executions>
          <execution>
            <phase>package</phase>
            <goals>
              <goal>shade</goal>
            </goals>
            <configuration>
              <transformers>
                <transformer implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer" />
              </transformers>
            </configuration>
          </execution>
        </executions>
      </plugin>
      <!-- disable surefire -->
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-surefire-plugin</artifactId>
        <configuration>
          <skipTests>true</skipTests>
        </configuration>
      </plugin>
      <plugin>
        <groupId>org.codehaus.mojo</groupId>
        <artifactId>build-helper-maven-plugin</artifactId>
        <executions>
          <execution>
            <id>add-source</id>
            <phase>generate-sources</phase>
            <goals>
              <goal>add-source</goal>
            </goals>
            <configuration>
              <sources>
                <source>src/main/scala</source>
              </sources>
            </configuration>
          </execution>
          <execution>
            <id>add-test-source</id>
            <phase>generate-test-sources</phase>
            <goals>
              <goal>add-test-source</goal>
            </goals>
            <configuration>
              <sources>
                <source>src/test/scala</source>
              </sources>
            </configuration>
          </execution>
        </executions>
      </plugin>
    </plugins>
  </build>
  <dependencies>
    <dependency>
      <groupId>org.bdgenomics.adam</groupId>
      <artifactId>adam-cli-spark2_${scala.version.prefix}</artifactId>
      <scope>compile</scope>
    </dependency>
  </dependencies>
</project>